Structure Alignment 

• Pairwise protein structure alignment

• Multiple protein structure alignment 

Dimension Reduction

• GLRAM : Generalized Low Rank Approximations of Matrices

• ULDA: Uncorrelated Linear Discriminant Analysis

• OLDA: Orthogonal Linear Discriminant Analysis

• KDA/QR: Kernel Discriminant Analysis via QR Decomposition

• AKDA/QR: Approximate Kernel Discriminant Analysis via QR Decomposition