Multiple structure alignment and consensus identification for proteins
Jieping Ye, Ivaylo Ilinkin, Ravi Janardan, and Adam Isom

Software (written in C) 

• Binary for linux

• Binary for sun-solaris

• Test datasets used in the paper (List of proteins for datasets 1--17)
• Raw Data (Protein structures in 3D coordinates)

Figures

• Fig 1: Comparison of choices of initial consensus structure: ``center'', and ``median''

  • SC-distance

  • Computational time

• Fig 2: Illustration of the multiple structure alignment using dataset 2

  • Alignment using the "Center" protein     Corresponding consensus

  • Alignment using the "Median" protein     Corresponding consensus

• Fig 3: Comparison of our algorithm and CE-MC on the ten datasets from HOMSTRAD 

• Percentage conserved

• Computational time