References

1

C. Ahlberg and B. Shneiderman. Visual information seeking: Tight coupling of dynamic query filters with starfield displays. In Proc. ACM CHI '94 Conference, pages 313--317, 1994.

2

S. Altschul, W. Gish, W. Miller, E. Myers, and D. Lipman. Basic Local Alignment Search Tool. Journal of Molecular Biology, 215:403--410, 1990.

3

D. Asimov. The grand tour: A tool for viewing multidimensional data. SIAM J. Sci. Statistical Computing, 6(1):128--143, 1985.

4

R. A. Becker, S. G. Eick, and A. R. Wilks. Visualizing network data. IEEE Transaction on Visualization and Computer Graphics, 1(1):16--28, 1995.

5

D. Benson, M. Boguski, D. Lipman, and J. Ostell. GenBank. Nucleic Acids Research, 22(17):3441--3444, 1994.

6

E. H. Chi, P. Barry, E. Shoop, J. Carlis, E. Retzel, and J. Riedl. Visualization of biological sequence similarity search results. In IEEE Visualization '95, pages 44--51. IEEE CS Press, 1995.

7

S. Crawford and T. Fall. Projection pursuit techniques for visualizing high-dimensional data sets. In IEEE Visualization '90, pages 94--108, 1990.

8

M. O. Dayhoff, R. M. Schwartz, and B. C. Orcutt. A model of evolutionary change in proteins. In M. O. Dayhoff, editor, Atlas of Protein Sequence and Structure, Vol. 5, Suppl. 3, chapter 22, pages 345--352. National Biomedical Research Foundation, 1978.

9

A. W. Donoho, D. L. Donoho, and M. Gask. Macspin: Dynamic graphics on a desktop computer. In W. Cleveland and M. McGill, editors, Dynamic Graphics for Statistics, pages 331--352. Wadsworth and Brooks/Cole, Belmount, Calif., 1988.

10

S. Feiner and C. Beshers. Visualizing n-dimensional virtual worlds with n-vision. Computer Graphics, 24(2):37--38, 1990.

11

W. Gish and D. States. Identification of protein coding regions by database similarity search. Nature Genetics, 3:266--272, 1993.

12

E. Hamori and J. Ruskin. H-curves, a novel method of representation of nucleotide series especially suited for long DNA sequences. Journal of Biological Chemistry, 258(2):1318--1327, 1983.

13

S. Henikoff and J. Henikoff. Performance evaluation of amino acid substitution matrices. Proteins: Structure, Function, and Genetics, 17:49--61, 1993.

14

A. Inselberg and B. Dimsdale. Parallel coordinates: A tool for visualizing multi-dimensional geometry. In IEEE Visualization '90, pages 361--378, 1990.

15

A. Inselberg and B. Dimsdale. Multi-dimensional lines I and II: Representations and proximity applications. SIAM J. on Appl. Math., 54(2):559--596, 1994.

16

H. J. Jeffrey. Chaos game representation of gene structure. Nucleic Acids Research, 18(8):2163--2170, 1990.

17

S. Karlin and S. F. Altschul. Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. Proc Natl Acad Sci U S A, 87:2264--2268, 1990.

18

J. W. Tukey, J. H. Friedman, and M. A. Fisherkeller. PRIM-9, an interactive multidimensional data display and analysis system. In W. Cleveland and M. McGill, editors, Dynamic Graphics for Statistics, pages 91--110. Wadsworth and Brooks/Cole, Belmount, Calif., 1988.

19

D. Wu, J. Roberge, D. J. Cork, B. G. Nguyen, and T. Grace. Computer visualization of long genomic sequences. In IEEE Visualization '93, pages 308--315. IEEE CS Press, 1993.